NDB ID: 7K32    PDB ID: 7K32 

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Title:

CRYSTAL STRUCTURE OF ENDONUCLEASE Q COMPLEX WITH 27-MER DUPLEX SUBSTRATE WITH AN ABASIC LESION AT THE ACTIVE SITE

Molecular Description:

Endonuclease Q/DNA complex

Deposited:

2020-09-10

Released:

2021-03-17

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Shi, K., Moeller, N.H., Banerjee, S., McCann, J.L., Carpenter, M.A., Yin, L., Moorthy, R., Orellana, K., Harki, D.A., Harris, R.S., Aihara, H.
Structural basis for recognition of distinct deaminated DNA lesions by endonuclease Q. 
Proc.Natl.Acad.Sci.USA, 118, pp. - , 2021.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

H 3

Cell Constants:

a = 154.02   b = 154.02   c = 118.51 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.2016 for 12328 reflections in the resolution range 88.59 to 3.11 Ångstroms with Fobs >  1.17 sigma(Fobs) and with I >  0.0 sigma(I)

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Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format) 1

Structure Factors (cif format)

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

NMR Restraints (cif format, Unix compressed(.gz))

XML | Complete with coordinates (xml format, GNU compressed(.gz))

XML | Coordinates only (xml format, GNU compressed(.gz))

XML | Header only (xml format, GNU compressed(.gz))