RNA Base-Pairs, Stacking, etc.
Interactive basepair map with 3D fragment visualization for: 7NEJ 
Base Pair Hydrogen Bonding Classification
Nucleic Acid Backbone Torsions
Base Pair Morphology Parameters
SOLUTION STRUCTURE OF DNA:RNA HYBRID DUPLEX
DNA (5'-D(*CP*TP*AP*(FFC)P*AP*CP*GP*G)-3')
RNA (5'-R(*CP*CP*GP*UP*GP*UP*AP*G)-3')
A DOUBLE HELIX
Click to show/hide 2 nucleic acid sequences
No Protein Sequence Found
Cabrero, C., Martin-Pintado, N., Mazzini, S., Gargallo, R., Eritja, R., Avino, A., Gonzalez, C.
Structural Effects of Incorporation of 2 -Deoxy-2 2 -difluorodeoxycytidine (Gemcitabine) in A- and B-form Duplexes. 
Chemistry, , pp. - , 2021.
SOLUTION NMR
Number of Models: 10 Structures
0.5 M DNA (5'-D(*CP*TP*AP*CP*AP*CP*GP*G)-3'), 0.5 M RNA (5'-R(*CP*CP*GP*UP*GP*UP*AP*G)-3'), 100 mM sodium chloride, 25 mM sodium phosphate, 0.5 % v/v DSS, 90% H2O/10% D2O 90% H2O/10% D2O
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
Coordinates (pdb format, Unix compressed(.gz))
Coordinates (cif format, Unix compressed(.gz))
NMR Restraints (cif format, Unix compressed(.gz))
XML | Complete with coordinates (xml format, GNU compressed(.gz))