NDB ID: 7YGP    PDB ID: 7YGP     NAKB: 7YGP 

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Title:

DNA DUPLEX CONTAINING 5OHU-T BASE PAIRS

Molecular Description:

Deposited:

2022-07-12

Released:

2023-05-24

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Torigoe, H., Kondo, J., Arakawa, F.
Specific binding of Hg 2+ to mismatched base pairs involving 5-hydroxyuracil in duplex DNA. 
J.Inorg.Biochem., 241, pp. 112125 - 112125, 2023.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 31 2 1

Cell Constants:

a = 36.672   b = 36.672   c = 54.99 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.2194 for 5336 reflections in the resolution range 20.787 to 1.997 Ångstroms with Fobs >  1.38 sigma(Fobs) and with I >  0.0 sigma(I)

Download Data:

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format) 1

Structure Factors (cif format)

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

NMR Restraints (cif format, Unix compressed(.gz))

XML | Complete with coordinates (xml format, GNU compressed(.gz))

XML | Coordinates only (xml format, GNU compressed(.gz))

XML | Header only (xml format, GNU compressed(.gz))