A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 31-May-2023 number of released structures: 12820
Search for released structures

NDB ID: 8E8B    PDB ID: 8E8B     NAKB: 8E8B 


Title:

HUMAN DNA POLYMERASE ETA-DNA-RU-ENDED PRIMER TERNARY MISMATCH COMPLEX:GROUND STATE AT PH7.0 (K+ MES) WITH 1 CA2+ ION

Molecular Description:

Deposited:

2022-08-25

Released:

2023-02-01

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Chang, C., Lee Luo, C., Eleraky, S., Lin, A., Zhou, G., Gao, Y.
Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity. 
J.Biol.Chem., 299, pp. 102938 - 102938, 2023.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 61

Cell Constants:

a = 97.87   b = 97.87   c = 82.13 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.1976 for 22256 reflections in the resolution range 32.04 to 2.2 Ångstroms with Fobs >  1.37 sigma(Fobs) and with I >  0.0 sigma(I)