NDB ID: AR0026    PDB ID: 1DQF     NAKB: AR0026 

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Title:

CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS

Molecular Description:

5'-R(*GP*CP*CP*AP*CP*CP*CP*UP*G)-3'
5'-R(*CP*AP*GP*GP*GP*UP*CP*GP*GP*C)-3'

Deposited:

2000-01-04

Released:

2000-11-13

Structural Keywords:

A DOUBLE HELIX, FLIPPED-OUT BASES

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Xiong, Y., Sundaralingam, M.
Two crystal forms of helix II of Xenopus laevis 5S rRNA with a cytosine bulge. 
RNA, 6, pp. 1316 - 1324, 2000.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 42 21 2

Cell Constants:

a = 57.15   b = 57.15   c = 43.54 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the CNS program. The R value is 0.204 for 3757 reflections in the resolution range 10.0 to 2.2 Ångstroms with Fobs >  2.0 sigma(Fobs) and with I >  0.0 sigma(I)

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Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format) 1

Structure Factors (cif format)

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

NMR Restraints (cif format, Unix compressed(.gz))

XML | Complete with coordinates (xml format, GNU compressed(.gz))

XML | Coordinates only (xml format, GNU compressed(.gz))

XML | Header only (xml format, GNU compressed(.gz))