A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 27-Jul-2016 number of released structures: 8382
Search for released structures

NDB ID: DR0007    PDB ID: 1LC4 


Title:

CRYSTAL STRUCTURE OF TOBRAMYCIN BOUND TO THE EUBACTERIAL 16S RRNA A SITE

Molecular Description:

5'-R(*UP*UP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*C)-3'
TOBRAMYCIN

Structural Keywords:

A DOUBLE HELIX, BULGES

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Vicens, Q., Westhof, E.
Crystal Structure of a Complex between the Aminoglycoside Tobramycin and an Oligonucleotide Containing the Ribosomal Decoding A Site 
Chem.Biol., 9, pp. 747 - 755, 2002.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 1 21 1

Cell Constants:

a = 46.9   b = 32.8   c = 52.0 (Ångstroms)

α = 90.0   β = 107.9   γ = 90.0 (degrees)

Refinement:

The structure was refined using the CNS 1.0 program. The R value is 0.0 for 4644 reflections in the resolution range 10.0 to 2.54 Ångstroms with Fobs >  1.5 sigma(Fobs) and with I >  0.0 sigma(I)