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NDB ID: DR0011    PDB ID: 1YRJ 


Title:

CRYSTAL STRUCTURE OF APRAMYCIN BOUND TO A RIBOSOMAL RNA A SITE OLIGONUCLEOTIDE

Molecular Description:

RNA/APRAMYCIN

Structural Keywords:

A DOUBLE HELIX, BULGES, OVERHANGING BASES, FLIPPED-OUT BASES

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Han, Q., Zhao, Q., Fish, S., Simonsen, K.B., Vourloumis, D., Froelich, J.M., Wall, D., Hermann, T.
Molecular recognition by glycoside pseudo base pairs and triples in an apramycin-RNA complex. 
Angew.Chem.Int.Ed.Engl., 44, pp. 2694 - 2700, 2005.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 21 21 2

Cell Constants:

a = 92.25   b = 30.9   c = 45.81 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the CNS program. The R value is 0.0 for 3712 reflections in the resolution range 8.0 to 2.7 Ångstroms with Fobs >  1.5 sigma(Fobs) and with I >  1.5 sigma(I)