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NDB ID: NA1381    PDB ID: 3VJR 


Title:

CRYSTAL STRUCTURE OF PEPTIDYL-TRNA HYDROLASE FROM ESCHERICHIA COLI IN COMPLEX WITH THE CCA-ACCEPTOR-T[PSI]C DOMAIN OF TRNA

Molecular Description:

Peptidyl-tRNA hydrolase (E.C.3.1.1.29)

Structural Keywords:

SINGLE STRAND, HAIRPIN LOOP

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Ito, K., Murakami, R., Mochizuki, M., Qi, H., Shimizu, Y., Miura, K., Ueda, T., Uchiumi, T.
Structural basis for the substrate recognition and catalysis of peptidyl-tRNA hydrolase. 
Nucleic Acids Res., 40, pp. 10521 - 10531, 2012.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 61

Cell Constants:

a = 55.07   b = 55.07   c = 413.1 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the REFMAC 5.5.0109 program. The R value is 0.19472 for 26216 reflections in the resolution range 50.0 to 2.4 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)