A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 5-Aug-2020 number of released structures: 10886
Search for released structures

NDB ID: NA2109    PDB ID: 4HP1 


Title:

CRYSTAL STRUCTURE OF TET3 IN COMPLEX WITH A NON-CPG DSDNA

Molecular Description:

PROTEIN/DNA Complex

Deposited:

2012-10-23

Released:

2012-12-05

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Xu, Y., Xu, C., Kato, A., Tempel, W., Abreu, J.G., Bian, C., Hu, Y., Hu, D., Zhao, B., Cerovina, T., Diao, J., Wu, F., He, H.H., Cui, Q., Clark, E., Ma, C., Barbara, A., Veenstra, G.J., Xu, G., Kaiser, U.B., Liu, X.S., Sugrue, S.P., He, X., Min, J., Kato, Y., Shi, Y.G.
Tet3 CXXC Domain and Dioxygenase Activity Cooperatively Regulate Key Genes for Xenopus Eye and Neural Development. 
Cell(Cambridge,Mass.), 151, pp. 1200 - 1213, 2012.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

C 1 2 1

Cell Constants:

a = 71.027   b = 39.517   c = 57.634 (Ångstroms)

α = 90.0   β = 91.03   γ = 90.0 (degrees)

Refinement:

The structure was refined using the REFMAC program. The R value is 0.221 for 7736 reflections in the resolution range 35.0 to 2.25 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)