NDB ID: PD0771    PDB ID: 2FDI     NAKB(beta): PD0771 

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Title:

CRYSTAL STRUCTURE OF ALKB IN COMPLEX WITH FE(II), 2-OXOGLUTARATE, AND METHYLATED TRINUCLEOTIDE T-MEA-T (AIR 3 HOURS)

Molecular Description:

Alkylated DNA repair protein alkB/DNA Complex
2-OXYGLUTARIC ACID
SUCCINIC ACID

Deposited:

2005-12-14

Released:

2006-02-21

Structural Keywords:

SINGLE STRAND

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Yu, B., Edstrom, W.C., Benach, J., Hamuro, Y., Weber, P.C., Gibney, B.R., Hunt, J.F.
Crystal structures of catalytic complexes of the oxidative DNA/RNA repair enzyme AlkB. 
Nature, 439, pp. 879 - 884, 2006.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 43

Cell Constants:

a = 40.646   b = 40.656   c = 117.924 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the CNS program. The R value is 0.0 for 16614 reflections in the resolution range 19.21 to 1.8 Ångstroms with Fobs >  1.0 sigma(Fobs) and with I >  0.0 sigma(I)

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Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

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Biological Assembly coordinates (pdb format) 1

Structure Factors (cif format)

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

NMR Restraints (cif format, Unix compressed(.gz))

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