NDB ID: PD0883    PDB ID: 2NL8     NAKB: PD0883 

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Title:

THE ORIGIN BINDING DOMAIN OF THE SV40 LARGE T ANTIGEN BOUND NON SPECIFICALLY TO A 17 BP PALINDROME DNA (SITES 1 AND 3)

Molecular Description:

Deposited:

2006-10-19

Released:

2006-12-12

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Bochkareva, E., Martynowski, D., Seitova, A., Bochkarev, A.
Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA 
Embo J., 25, pp. 5961 - 5969, 2006.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 43 21 2

Cell Constants:

a = 43.87   b = 43.87   c = 238.308 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the REFMAC program. The R value is 0.23999 for 10057 reflections in the resolution range 19.92 to 2.3 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)

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Biological Assembly coordinates (pdb format) 1

Structure Factors (cif format)

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

NMR Restraints (cif format, Unix compressed(.gz))

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