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NDB ID: PD1044    PDB ID: 2RDJ 


Title:

SNAPSHOTS OF A Y-FAMILY DNA POLYMERASE IN REPLICATION: DPO4 IN APO AND BINARY/TERNARY COMPLEX FORMS

Molecular Description:

DNA polymerase IV(E.C.2.7.7.7)/DNA

Deposited:

2007-09-24

Released:

2008-06-24

Structural Keywords:

B DOUBLE HELIX, OVERHANGING BASES

Nucleic Acid Sequence:

Click to show/hide 3 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Wong, J.H., Fiala, K.A., Suo, Z., Ling, H.
Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4. 
J.Mol.Biol., 379, pp. 317 - 330, 2008.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 21 21 21

Cell Constants:

a = 97.993   b = 102.51   c = 106.109 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the REFMAC program. The R value is 0.221 for 51924 reflections in the resolution range 24.11 to 2.2 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  2.0 sigma(I)