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NDB ID: PD1261    PDB ID: 3GNA 


Title:

CRYSTAL STRUCTURE OF THE RAG1 NONAMER-BINDING DOMAIN WITH DNA

Molecular Description:

V(D)J recombination-activating protein 1

Deposited:

2009-03-16

Released:

2009-04-28

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Yin, F.F., Bailey, S., Innis, C.A., Ciubotaru, M., Kamtekar, S., Steitz, T.A., Schatz, D.G.
Structure of the RAG1 nonamer binding domain with DNA reveals a dimer that mediates DNA synapsis. 
Nat.Struct.Mol.Biol., 16, pp. 499 - 508, 2009.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

I 4 2 2

Cell Constants:

a = 97.47   b = 97.47   c = 69.78 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the REFMAC program. The R value is 0.23789 for 6475 reflections in the resolution range 20.0 to 2.4 Ångstroms with Fobs >  1.0 sigma(Fobs) and with I >  0.0 sigma(I)