A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Sep-2019 number of released structures: 10387
Search for released structures

NDB ID: PDE0118    PDB ID: 1HAP 


Title:

COMPLEX OF HUMAN ALPHA-THROMBIN WITH A 15MER OLIGONUCLEOTIDE GGTTGGTGTGGTTGG (BASED ON X-RAY MODEL OF DNA)

Molecular Description:

ALPHA-THROMBIN (E.C.3.4.21.5)/DNA COMPLEX + D-PHE-PRO-ARG-CHLOROMETHYLKETONE (PPACK)

Deposited:

1995-10-03

Released:

1996-04-03

Structural Keywords:

QUADRUPLE HELIX

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 2 protein sequences

Primary Citation:

Padmanabhan, K., Tulinsky, A.
An ambiguous structure of a DNA 15-mer thrombin complex. 
Acta Crystallogr.,Sect.D, 52, pp. 272 - 282, 1996.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 21 21 21

Cell Constants:

a = 58.28   b = 77.61   c = 100.02 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the NUCLIN program. The R value is 0.161 for 7717 reflections in the resolution range 10.0 to 2.8 Ångstroms with Fobs >  2.0 sigma(Fobs) and with I >  0.0 sigma(I)