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NDB ID: PR0132    PDB ID: 1U1Y 


Title:

CRYSTAL STRUCTURE OF A COMPLEX BETWEEN WT BACTERIOPHAGE MS2 COAT PROTEIN AND AN F5 APTAMER RNA STEMLOOP WITH 2AMINOPURINE SUBSTITUTED AT THE-10 POSITION

Molecular Description:

coat protein

Structural Keywords:

SINGLE STRAND, HAIRPIN LOOP, BULGE LOOP

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Horn, W.T., Convery, M.A., Stonehouse, N.J., Adams, C.J., Liljas, L., Phillips, S.E., Stockley, P.G.
The crystal structure of a high affinity RNA stem-loop complexed with the bacteriophage MS2 capsid: further challenges in the modeling of ligand-RNA interactions. 
Rna, 10, pp. 1776 - 1782, 2004.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

H 3 2

Cell Constants:

a = 288.61   b = 288.61   c = 654.68 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the X-PLOR 3.851 program. The R value is 0.188 for 170082 reflections in the resolution range 30.0 to 2.85 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)