A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Nov-2018 number of released structures: 9899
Search for released structures

NDB ID: RR0063    PDB ID: 1NJM 

Title:

THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH A TRNA ACCEPTOR STEM MIMIC (ASM) AND THE ANTIBIOTIC SPARSOMYCIN

Molecular Description:

50S Large ribosomal subunit

Structural Keywords:

SINGLE STRAND, LOOPS, BULGES, FLIPPED-OUT BASES, BASE TRIPLET

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

Click to show/hide 2 protein sequences

Primary Citation:

Bashan, A., Agmon, I., Zarivatch, R., Schluenzen, F., Harms, J.M., Berisio, R., Bartels, H., Franceschi, F., Auerbach, T., Hansen, H.A., Kossoy, E., Kessler, M., Yonath, A.
Structural basis of the ribosomal machinery for Peptide bond formation, translocation, and nascent chain progression 
Mol.Cell, 11, pp. 91 - 102, 2003.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

I 2 2 2

Cell Constants:

a = 169.6   b = 409.4   c = 695.1 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the CNS program. The R value is 0.2841 for 250710 reflections in the resolution range 15.0 to 3.6 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)

ndbadmin@ndbserver.rutgers.edu ©1995-2018 The Nucleic Acid Database Project | Rutgers, The State University of New Jersey