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NDB ID: UR0037    PDB ID: 1T0D 


Title:

CRYSTAL STRUCTURE OF 2-AMINOPURINE LABELLED BACTERIAL DECODING SITE RNA

Molecular Description:

5'-R(*GP*GP*UP*GP*GP*UP*GP*(MTU)P*AP*GP*UP*CP*GP*CP*UP*GP*G)-3'

Structural Keywords:

DOUBLE HELIX, OVERHANGING BASES, INTERNAL LOOP, FLIPPED OUT BASES

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Shandrick, S., Zhao, Q., Han, Q., Ayida, B.K., Takahashi, M., Winters, G.C., Simonsen, K.B., Vourloumis, D., Hermann, T.
Monitoring molecular recognition of the ribosomal decoding site. 
Angew.Chem.Int.Ed.Engl., 43, pp. 3177 - 3182, 2004.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 1 21 1

Cell Constants:

a = 31.64   b = 87.32   c = 32.79 (Ångstroms)

α = 90.0   β = 93.27   γ = 90.0 (degrees)

Refinement:

The structure was refined using the CNS program. The R value is 0.0 for 8285 reflections in the resolution range 8.0 to 2.2 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)