A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 28-Sep-2016 number of released structures: 8524
Search for released structures

NDB ID: UR0105    PDB ID: 2IL9 


Title:

CRYSTAL STRUCTURE OF PLAUTIA STALI INTESTINE VIRUS INTERGENIC REGION INTERNAL RIBOSOME ENTRY SITE RIBOSOMAL BINDING DOMAIN RNA AT 3.1 ANGSTROMS

Molecular Description:

Ribosomal Binding Domain of the IRES RNA

Structural Keywords:

SINGLE STRAND, LOOPS, BULGES, OVERHANGING BASES

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Pfingsten, J.S., Costantino, D.A., Kieft, J.S.
Structural basis for ribosome recruitment and manipulation by a viral IRES RNA 
Science, 314, pp. 1450 - 1454, 2006.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 63

Cell Constants:

a = 133.57   b = 133.57   c = 160.425 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the CNS 1.1 program. The R value is 0.0 for 26973 reflections in the resolution range 16.97 to 3.1 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)